Representative Publications 2023
1. Zhang X#, Cui M#, Wang S#, Han F#, Xu P, Teng L, Zhao H, Wang P, Yue G, Zhao Y, Liu G, Li K, Zhang J, Liang X, Zhang Y, Liu Z*, Zhong C*, Liu W*. Extensible and self-recoverable proteinaceous materials derived from scallop byssal thread. Nature Communications. 2023, 13:2731.
2. Yu H#, Li Y#, *, Han W, Bao L, Liu F, Ma Y, Pu Z, Zeng Q, Zhang L, Bao Z, Wang S*. Pan-evolutionary and regulatory genome architecture delineated by integrated macro-and microsynteny approach. Nature Protocols. (Accepted)
3. Xie H#, Kang Y#, Liu J, Huang M, Dai Z, Shi J, Wang S, Li L, Li Y, Zheng P, Sun Y, Han Q, Zhang J, Zhu Z, Xu L, Yelick PC*, Cao M *, Zhao C *. Ependymal polarity defects coupled with disorganized ciliary beating drive abnormal cerebrospinal fluid flow and spine curvature in zebrafish, PLoS Biology. 2023, 21(3): e3002008.
4. Peng H., Qiao J., Wang G., Shi W., Xia F., Qiao R., Dong B.* A collagen-rich arch in the urochordate notochord coordinates cell shaping and multi-tissue elongation. Current Biology. 2023, 33: 5390-5403.
5. Wei J. #, Liu, P. #, Liu F. #, Jiang A., Qiao J, Pu Z., Wang B., Zhang J., Jia D., Li Y.*, Wang S* and Dong B*. EDomics: a comprehensive and comparative multiomics database for animal evo-devo. Nucleic Acids Research. 2023, 51, D913–D923.
6. Zhu P#, Zheng P #, Kong X, Wang S, Cao M *, Zhao C *. Rassf7a promotes spinal cord regeneration and controls spindle orientation in neural progenitor cells, EMBO Reports. 2023, 24(1): e54984.
7. Zhang K, Li Z, Zhu Q, Cao H, He X, Zhang XH, Liu W*, Lyu Q*. Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements. Communications Biology. 2023, Aug 2;5(1):782.
8. Pan Z#, Wei XJ#, Li SJ, Guo H, Li ZH, Zhang KK, Lyu QQ, Liu WZ*, Yang QC*, Cheng DD*. Sulfated alginate oligosaccharide exerts antitumor activity and autophagy induction by inactivating MEK1/ERK/mTOR signaling in a KSR1-dependent manner in osteosarcoma. Oncogenesis. 2023, 11(1):16.
9. Liu J#, Xie H#, Wu M, Hu Y, Kang Y*. The role of cilia during organogenesis in zebrafish. Open Biology. 2023, 13(12):230228.
10. Liu A., Ouyang X., Wang Z., Dong B.* ELMOD3-Rab1A-Flotillin2 cascade regulates lumen formation via vesicle trafficking in Ciona notochord. Open Biology.2023, 13: 220367.
11. Lin B., Shi W., Lu Q., Shito T., Yu H., Dong B.* Establishment of a developmental atlas and transgenetic tools in the ascidian Styela clava. Marine Life Sciences & Technology. 2023, 5: 435-454.
12. Lu M#, Hayat R#, Zhang X#, Jiao Y, Huang J, Huangfu Y, Jiang M, Fu J, Jiang Q, Gu Y, Wang S, Akerberg AA, Su Y*, Zhao L*. Comparative analysis of the cardiac structure and transcriptome of scallop and snail, perspectives on heart chamber evolution. Marine Life Science & Technology. 2023, 5: 478-491.
13. Wang L, Zhang X, Xu P, Yan J, Zhang Y, Su H,Sun C, Lu Q*, Liu W*. Exploration of sea anemone-inspired high-performance biomaterials with enhanced antioxidant activity. Bioactive Materials. 2023, 10:504-514.
14. Xu P, Wang L, Zhang X, Yan J, Liu W*. High-performance smart hydrogels with redox-responsive properties inspired by Scallop Byssus. ACS Applied Materials & Interfacesserves. 2023, 14(1):214-224.
15. Zhu X, Zhang J, Li M, Hou X, Liu A, Dong X, Wang W, Xing Q*, Huang X, Wang S, Hu J, Bao Z. Cardiac performance and heart gene network provide dynamic responses of bay scallop Argopecten irradians irradians exposure to marine heatwaves. Science of the Total Environment. 2023, 882: 163594.
16. Cai Y#, Lv J#, Li R#, Huang X, Wang S, Zeng Q*. Deqformer: High-definition and scalable deep learning probe design method. Briefings in Bioinformatics. (Accepted)
17. Yang L., Zhang J., Liu D., Han T., Qin Q., Wang A., Dong B.*. Ancestral glycoprotein hormone and its cognate receptor present in primitive chordate ascidian: Molecular identification and functional characterization. International Journal of Biological Macromolecules.2023, 229, 401-412.
18. Ouyang X. Wu B., Yu H., Dong B*. DYRK1-mediated phosphorylation of endocytic components is required for extracellular lumen expansion in ascidian notochord. Biological Research.2023, 56: 10.
19. Zhang W, Zhang Y, Shi X, Wang S, Bao Y*. Hemoglobin wonders: A fascinating gas transporters dive into molluscs. Critical Reviews in Biochemistry & Molecular Biology. (In press)
20. Ouyang X. Wang Z., Wu B., Yang X., Dong B*. The conserved transcriptional-activation activity identified in dual-specificity tyrosine-(Y)-phosphorylation-regulated kinase 1. Biomolecules.2023, 13 (2), 283.
21. Wang Z., Ouyang X., Tan Z., Yang L.*, Dong B. Quantitative phosphoproteomics reveals the requirement of DYRK1-mediated phosphorylation of ion transport- and cell junction-related proteins for notochord lumenogenesis in ascidian. Cells.2023, 12(6), 921.
22. Qiao J., Peng H., Dong B.*. Development and application of an optogenetic manipulation system to suppress actomyosin activity in Ciona epidermis. International Journal of Molecular Sciences.2023, 24(6), 5707.
23. Zhang W., Jiang A., Yu H.*, Dong B*. Comparative transcriptomic analysis reveals the functionally segmented intestine in tunicate ascidian. International Journal of Molecular Sciences.2023, 24, 6270.
24. Wu Y., Dong B., Lin B. Cell polarity in a complex environment. Frontiers in Cell and Developmental Biology. 2023, 11:1329874.
25. Li J.#, Han S.,#, Zhu Y., Dong B.*. A novel terpenoid compound isolated from ascidian Halocynthia rotetzi exhibits the inhibition activity on tumor cell proliferation. Marine Drugs. 2023, 21, 51.
26. Jiang A., Zhang W., Wei J., Liu P., Dong B.*. Transcriptional analysis of the endostyle reveals pharyngeal organ functions in ascidian. Biology.2023, 12(2), 245.
27. Liu T, Wei H, Zhang L, Liu L, Li Y, Shu Y, Yang Y, Zhao B, Xing Q, Zeng Q, Wang C, Wang S, Bao Z, Zhang L*. K252a inhibition of sperm viability for efficient cross breeding of hermaphroditic bivalves. Aquaculture. 2023, 577: 739930.
28. Long H., Dong B.* Special topic on EvoDevo: emerging models and perspectives. Marine Life Sciences & Technology. 2023, 5: 431-434.
29. He X, Liao Y, Yang Z, Liu H, Wang S, Bao Y*. A genome-wide association study to identify the genes associated with growth-related traits in Tegillarca granosa. Aquaculture. 2024, 578: 740127.
30. Wang Z., Tan Z., Bi J., Liu A., Jiang A., Dong B*. Proteomic identification of intracellular vesicle trafficking and protein glycosylation requirements for lumen inflation in Ciona notochord. Proteomics. 2023, e2200460.
31. Li Y, Wang Y, Wang S, Zheng R, Bao Z, Lu Y*. Preliminary study of laser-induced breakdown spectroscopy for Mg/Ca investigation in cultured scallop shells. Journal of Laser Applications. 2023, 35: 022018.
32. 陈松林*,徐文腾,卢昇,胡炜,王德寿,胡晓丽,周茜,刘清华,赵紫霞,覃钦博,王师,刘洋,崔忠凯.生物技术助力水产种业高质量发展战略研究. 中国工程科学. 2023, 25: 214-226.
33. 乔润雨,彭鸿哲,董波*,海鞘细胞核骨架与细胞质骨架连接复合体相关基因的克隆及表达分析. 中国海洋大学学报,2023, 53(5): 89-100.
34. 韩善浩,李建辉,祝玉婷,高宏伟*,董波*。真海鞘根索被囊乙醇提取物通过线粒体凋亡通路抑制人肝癌HepG 2细胞增殖. 中国海洋大学学报. 2023, 53(6): 85-94.